Chan Yul Yoo

Dr. Chan Yul Yoo

Adjunct Assistant Professor

Dept. of Plant Biology, Ecology, and Evolution

301 Physical Sciences, Stillwater, OK 74078-3013, USA

405-744-5559

chanyul.yoo@okstate.edu

 

Research

My research interest is to understand how plants control growth and development to improve adaptation in response to environmental changes. Plants have evolved with adaptive responses to perceive environmental changes and integrate these external signals with their internal developmental programs to optimize growth and improve survival throughout the whole life cycle. My research is primarily focused on understanding the genetic and molecular mechanisms to control plant growth and chloroplast development through light signaling pathways in response to light and abiotic stresses using a combination of genetics, molecular biology, cell biology, biochemistry, and genomics. The ultimate goal of my research is to improve agricultural productivity and sustainability by developing climate-resilient crop plants.

 

Recent Publications

 

For most recent publication list, see Google Scholar

Yoo CY, Han S, Chen M (2020) Nucleus-to-plastid phytochrome signaling in controlling chloroplast biogenesis. Annu Plant Rev 3:251-280 (https://doi.org/10.1002/9781119312994.apr0615)

Yoo CY, Pasoreck EK, Wang H, Cao J, Blaha GM, Weigel D, Chen M (2019) Phytochrome activates the plastid-encoded RNA polymerase for chloroplast biogenesis via nucleus-to-plastid signaling. Nature Commun 10:2629 (https://doi.org/10.1038/s41467-019-10518-0)

Yang EJ*, Yoo CY*, Liu J*, Wang H, Cao J, Li F, Pryer K, Sun T, Weigel D, Zhou P, Chen M (2019) NCP activates chloroplast transcription by controlling light-dependent dual nuclear and plastidial switches Nature Commun 10:2630 (https://doi.org/10.1038/s41467-019-10517-1)
*Co-first authors

Yoo CY, Williams D, Chen, M (2019) Quantitative analysis of photobodies. Methods Mol Biol 2026:135-141 (https://doi.org/10.1007/978-1-4939-9612-4_10)

Yoo CY, Mano N, Finkler A, Weng H, Day IS, Reddy ASN, Poovaiah BW, Fromm H, Hasegawa, PM, Mickelbart MV (2019) A Ca2+/CaM-regulated transcriptional switch modulates stomatal development in response to water deficit. Sci Rep 9:12282 (https://doi.org/10.1038/s41598-019-47529-2)

Nevarez PA, Qiu Y, Inoue H, Yoo CY, Benfey PN, Schnell DJ, Chen M (2017) Mechanism of dual-targeting of the phytochrome signaling component HEMERA/pTAC12 to plastids and the nucleus. Plant Physiol 173:1953-1966 (https://doi.org/10.1104/pp.16.00116)

Sandoval JF, Yoo CY, Gosney MJ, Mickelbart MV (2016) Growth of Arabidopsis thaliana and Eutrema salsugineum in a closed growing system designed for quantification of plant water use. J. Plant Physiol 193:110-118 (https://doi.org/10.1016/j.jplph.2016.02.010)

Huang H, Yoo CY, Bindbeutel RK, Goldsworthy J, Tielking A, Alvarez S, Naldrett MH, Evans B, Chen M, Nusinow DA (2016) PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis, eLife 5:e13292 (https://doi.org/10.7554/eLife.13292)

Zhou XF*, Jin YH*, Yoo CY, Lin XL, Kim WY, Yun DJ, Bressan RA, Hasegawa PM, Jin JB (2013) Cyclin H;1 regulates drought stress response and blue light-induced stomatal opening by inhibiting ROS accumulation in Arabidopsis. Plant Physiol 162:1030-1041 (https://doi.org/10.1104/pp.113.215798)

Weng H, Yoo CY, Gosney MJ, Hasegawa PM, Mickelbart MV (2012) Poplar GTL1 is a calcium/calmodulin-binding transcription factor that functions in plant water use efficiency and drought tolerance. PLoS ONE 7:e32925 (https://doi.org/10.1371/journal.pone.0032925)

Yoo CY, Hasegawa PM, Mickelbart MV (2011) Regulation of stomatal density by the GTL1 transcription factor for improving water use efficiency. Plant Signal Behav 6:1069-1071
(https://doi.org/10.4161/psb.6.7.15254)

Miura K, Lee J, Gong Q, Ma S, Jin JB, Yoo CY, Miura T, Sato A, Bohnert HJ, Hasegawa PM (2011) SIZ1 regulation of phosphate starvation-induced root architecture remodeling involves the control of auxin accumulation. Plant Physiol 155:1000-1012 (https://doi.org/10.1104/pp.110.165191)

Yoo CY, Pence HE, Jin JB, Miura K, Gosney MJ, Hasegawa PM, Mickelbart MV (2010) The Arabidopsis GTL1 transcription factor regulates water use efficiency and drought tolerance by modulating via transrepression of SDD1. Plant Cell 22:4128-4141 (https://doi.org/10.1105/tpc.110.078691)

Yoo CY, Pence HE, Hasegawa PM, Mickelbart MV (2009) Regulation of transpiration to improve crop water use. Crit Rev Plant Sci 28:410-431 (https://doi.org/10.1080/07352680903173175)

Miura K, Lee J, Jin JB, Yoo CY, Miura T, Hasegawa PM (2009) Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling. Proc Natl Acad Sci USA 106:5418-5423 (https://doi.org/10.1073/pnas.0811088106)

Jin JB, Jin YH, Lee J, Miura K, Yoo CY, Kim WY, Van Oosten M, Hyun Y, Somers DE, Lee I, Yun DJ, Bressan RA, Hasegawa PM (2008) The SUMO E3 ligase, AtSIZ1 flowering by controlling a salicylic promotion pathway and through affects on FLC chromatin structure. Plant J 53:530-540 (https://doi.org/10.1111/j.1365-313X.2007.03359.x)

Miura K, Jin JB, Lee J, Yoo CY, Stirm V, Miura T, Ashworth EN, Bressan RA, Yun DJ, Hasegawa PM (2007) SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance in Arabidopsis. Plant Cell 19:1403-1414 (https://doi.org/10.1105/tpc.106.048397)

Lee J, Nam J, Park HC, Na G, Miura K, Jin JB, Yoo CY, Baek D, Kim DH, Jeong JC, Kim D, Lee SY, Salt DE, Mengiste T, Gong Q, Ma S, Bohnert HJ, Kwak SS, Bressan RA, Hasegawa PM, Yun DJ (2007) Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase. Plant J 49:79-90 (https://doi.org/10.1111/j.1365-313X.2006.02947.x)

Yoo CY, Miura K, Jin JB, Lee J, Park HC, Salt DE, Yun DJ, Bressan RA, Hasegawa PM (2006) SIZ1 small ubiquitin-like modifier E3 ligase facilitates basal thermotolerance in Arabidopsis independent of salicylic acid. Plant Physiol 142:1548-1558 (https://doi.org/10.1104/pp.106.088831)